{
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"source": [
"# COMPASS Model Diagnostics 2: Electric Bogaloo\n",
"\n",
"A number of plots are provided from ADF. The full output from the stand-alone ADF configuration is in the link below.\n",
"\n",
"\n",
"Note that in standalone format (eg, CUPiD run not through CESM workflow), ADF is currently run by users via the following process:\n",
"1) Install ADF and activate cupid-analysis\n",
"2) Use the `CUPiD/helper_scripts/generate_adf_config_file.py` script to generate an ADF config file based on a CUPiD configuration file.\n",
" * `cd CUPiD/examples/external_diag_packages`\n",
" * `../../helper_scripts/generate_adf_config_file.py --cupid-config-loc . --adf-template ../../externals/ADF/config_amwg_default_plots.yaml --out-file ADF_config.yaml`\n",
"3) Run ADF with the newly created configuration file.\n",
" * `../../externals/ADF/run_adf_diag ADF_config.yaml`"
]
},
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"parameters",
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"source": [
"adf_root = \".\"\n",
"case_name = None\n",
"base_case_name = None\n",
"start_date = \"\"\n",
"end_date = \"\"\n",
"base_start_date = None\n",
"base_end_date = None\n",
"key_plots = None\n",
"compare_obs = False\n",
"var_list = [\"T\"]\n",
"compass_root = \".\"\n",
"runs_dict = {}\n",
"\n",
"# adf_root will be external_diag_packages/computed_notebooks/ADF/"
]
},
{
"cell_type": "code",
"execution_count": 2,
"id": "17246cfd",
"metadata": {
"execution": {
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"tags": [
"injected-parameters"
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},
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"source": [
"# Parameters\n",
"case_name = \"b.e23_alpha17f.BLT1850.ne30_t232.092\"\n",
"base_case_name = \"b.e30_beta02.BLT1850.ne30_t232.104\"\n",
"case_nickname = \"BLT1850_92\"\n",
"base_case_nickname = \"BLT1850_104\"\n",
"CESM_output_dir = \"/glade/campaign/cesm/development/cross-wg/diagnostic_framework/CESM_output_for_testing\"\n",
"start_date = \"0001-01-01\"\n",
"end_date = \"0021-01-01\"\n",
"climo_start_date = \"0001-01-01\"\n",
"climo_end_date = \"0021-01-01\"\n",
"base_start_date = \"0001-01-01\"\n",
"base_end_date = \"0045-01-01\"\n",
"base_climo_start_date = \"0001-01-01\"\n",
"base_climo_end_date = \"0021-01-01\"\n",
"obs_data_dir = (\n",
" \"/glade/campaign/cesm/development/cross-wg/diagnostic_framework/CUPiD_obs_data\"\n",
")\n",
"ts_dir = None\n",
"lc_kwargs = {\"threads_per_worker\": 1}\n",
"serial = False\n",
"compass_root = \"/glade/work/richling/ADF/ADF_dev/Justin_ADF_2/ADF/adf_try_plots/f.e21.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull/T/ERA5/RF13/\"\n",
"runs_dict = {\n",
" \"f.e21.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull\": [\n",
" \"f.e21.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull_tau12h.001\",\n",
" \"f.e21.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull_tau24h.001\",\n",
" ],\n",
" \"f.e30_cam6_4_120.FHISTC_LTso.ne30pg3_ne30pg3_mg17.SOCRATES_nudgeUVTfull_withCOSP\": [\n",
" \"f.e30_cam6_4_120.FHISTC_LTso.ne30pg3_ne30pg3_mg17.SOCRATES_nudgeUVTfull_withCOSP_tau6h.001\",\n",
" \"f.e30_cam6_4_120.FHISTC_LTso.ne30pg3_ne30pg3_mg17.SOCRATES_nudgeUVTfull_withCOSP_tau12h.001\",\n",
" ],\n",
"}\n",
"subset_kwargs = {}\n",
"product = \"/glade/derecho/scratch/richling/compass-cupid/CUPiD/examples/external_diag_packages/computed_notebooks//atm/COMPASS_model_diags_2.ipynb\"\n"
]
},
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"id": "84925f9d",
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"execution": {
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"runs_dict_tmp = {}\n",
"if isinstance(runs_dict, list):\n",
" for run in runs_dict:\n",
" runs_dict_tmp[run] = [run]\n",
" runs_dict = runs_dict_tmp"
]
},
{
"cell_type": "markdown",
"id": "f9234aec-1fe5-4bbf-ad6c-fb565297afbe",
"metadata": {
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"source": [
"## Key Metrics from COMPASS Model Diagnostics (CMD)\n",
"\n",
"Some important things to look at from CMD include a slap to the face and then a hug:"
]
},
{
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"hide-input"
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"source": [
"for path_to_key_plot in key_plots:\n",
" full_path = os.path.join(adf_root, path_to_key_plot)\n",
" if os.path.isfile(full_path):\n",
" display(Image(full_pbath))"
]
},
{
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"execution_count": 4,
"id": "06d29973",
"metadata": {
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"source": [
"def slider(case_name, image_dir, ldrop=None, settings_list=None, rdrop=None):\n",
" import os\n",
" import re\n",
" from glob import glob\n",
" from PIL import Image\n",
" from io import BytesIO\n",
" import base64\n",
" from IPython.display import display, HTML\n",
" import ipywidgets as widgets\n",
" from ipywidgets import Layout\n",
"\n",
" tooltip_dict = {\n",
" \"Nudge_Uprof\": \"\"\"Selectively apply nudging to U:\n",
"\n",
" OFF = Switch off nudging\n",
" ON = Apply nudging everywhere\n",
" WINDOW = Apply window function to\n",
" nudging tendencies.\n",
" \n",
" 0 = OFF\n",
" 1 = ON\n",
" 2 = WINDOW\n",
" \"\"\",\n",
" #\"nudge_uprof\": \"Profile of zonal wind nudging\",\n",
" \"Nudge_Ucoef\": \"\"\"Selectively adjust the nudging strength applied to U. (normalized) [0.,1.]\n",
" \"\"\",\n",
" \"Nudge_Hwin_lat0\": \"\"\"Specify the horizontal center of the\n",
" window (lat0) in degrees. [-90., +90.]\"\"\",\n",
" \"Nudge_Hwin_lon0\":\"\"\"Specify the horizontal center of the\n",
" window (lon0) in degrees. [ 0. , 360.]\"\"\",\n",
" \"Nudge_Hwin_latWidth\": \"\"\"Specify the lat width of the\n",
" horizontal window in degrees.\n",
" Setting a width to a large value\n",
" (e.g. 999.) renders the window\n",
" constant in that direction.\n",
" \n",
" >0\"\"\",\n",
" \"Nudge_Hwin_lonWidth\": \"\"\"Specify the lon width of the\n",
" horizontal window in degrees.\n",
" Setting a width to a large value\n",
" (e.g. 999.) renders the window\n",
" constant in that direction.\n",
" \n",
" >0\"\"\",\n",
" \"Nudge_Vwin_Hindex\": \"Vertical window high index\",\n",
" \"Nudge_Vwin_Lindex\": \"Vertical window low index\",\n",
" \"Nudge_Vwin_Hdelta\": \"Vertical window high delta\",\n",
" \"Nudge_Vwin_Ldelta\": \"Vertical window low delta\",\n",
" \"Nudge_Vwin_Invert\":\"\"\"A logical flag used to invert the\n",
" horizontal window function to get its\n",
" compliment.\n",
" \n",
" True/False\"\"\",\n",
" \"Nudge_Hwin_latDelta\": \"Horizontal lat delta\",\n",
" \"Nudge_Hwin_lonDelta\": \"Horizontal lon delta\",\n",
" \"Nudge_Hwin_Invert\":\"\"\"A logical flag used to invert the\n",
" horizontal window function to get its\n",
" compliment.\n",
" (e.g. to nudge outside a given window)\n",
" \n",
" True/False\"\"\",\n",
" \"Nudge_TimeScale_Opt\":\"\"\"Select the timescale for the relaxation:\n",
"\n",
" WEAK = Constant time scale based in\n",
" the time interval of Target values.\n",
" \n",
" STRONG = Variable timescale which\n",
" gets stronger near each Target time.\n",
" \n",
" 0 = WEAK\n",
" 1 = STRONG\n",
" \"\"\",\n",
" \"Nudge_Force_Opt\":\"\"\"Select the form of the Target values:\n",
"\n",
" NEXT = Target at next future time\n",
" LINEAR = Linearly interpolate Target\n",
" values to current model time.\n",
"\n",
" 0 = NEXT\n",
" 1 = LINEAR\n",
" \"\"\"\n",
" }\n",
"\n",
"\n",
" link_dict = {\n",
" \"Nudge_Uprof\": \"https://ncar.github.io/CAM/doc/build/html/users_guide/physics-modifications-via-the-namelist.html?highlight=nudge#namelist-values\",\n",
" \"Nudge_Ucoef\": \"https://ncar.github.io/CAM/doc/build/html/users_guide/physics-modifications-via-the-namelist.html?highlight=nudge#namelist-values\",\n",
" \"Nudge_TimeScale_Opt\":\"www.google.com\",\n",
" #\"nudge_timescale_opt\":\"www.google.com\"\n",
" }\n",
"\n",
" if not image_dir:\n",
" print(\"No image directory :/\")\n",
" return\n",
"\n",
" # --- Detect levels ---\n",
" lev_pattern = re.compile(r'(\\d+)hPa\\.png$')\n",
" all_files = os.listdir(image_dir)\n",
" levels = sorted({lev_pattern.search(f).group(1) for f in all_files if lev_pattern.search(f)})\n",
"\n",
" if not levels:\n",
" print(\"No level-specific image files found.\")\n",
" return\n",
"\n",
" # Grab all PNG files\n",
" files = glob(os.path.join(image_dir, \"*.png\"))\n",
"\n",
" # Regex to extract timestamp after hPa_ and before .png\n",
" timestamp_pattern = re.compile(r\"hPa_(\\d{4}_\\d{2}_\\d{2}_\\d{2}:\\d{2})\\.png$\")\n",
"\n",
" timestamps = []\n",
" for f in all_files:\n",
" base = os.path.basename(f)\n",
" m = timestamp_pattern.search(base)\n",
" if m:\n",
" timestamps.append(m.group(1))\n",
"\n",
" # Optional: sort by timestamp\n",
" timestamps = sorted(timestamps)\n",
" print(timestamps)\n",
" # Widgets\n",
" level_dropdown = widgets.Dropdown(options=levels, value=levels[0], description=\"Level (hPa)\")\n",
" slider = widgets.IntSlider(min=0, max=0, step=1, description='Time Step')\n",
" #time_label = widgets.Label(value=str(timestamps[0]))\n",
" #def update_label(change):\n",
" # time_label.value = timestamps[slider.value].strftime(\"%Y-%m-%d %H:%M\")\n",
" html_widget = widgets.HTML()\n",
"\n",
" def get_images_for_level(level):\n",
" level = str(level)\n",
" level_files = sorted([\n",
" os.path.join(image_dir, f) for f in os.listdir(image_dir)\n",
" if f.endswith(f'{level}hPa.png')\n",
" ])\n",
" timestamps = [\n",
" '-'.join(os.path.basename(f).split('_')[1:4]) + ' ' + os.path.basename(f).split('_')[4]\n",
" for f in level_files\n",
" ]\n",
" return level_files, timestamps\n",
"\n",
" image_files, timestamps = get_images_for_level(levels[0])\n",
" print(timestamps)\n",
" #image_files = get_images_for_level(levels[0])\n",
" slider.max = max(0, len(image_files) - 1)\n",
"\n",
" def image_to_html(path):\n",
" img = Image.open(path).resize((1000, 300))\n",
" buffer = BytesIO()\n",
" img.save(buffer, format='PNG')\n",
" b64 = base64.b64encode(buffer.getvalue()).decode()\n",
" return f\"\"\n",
"\n",
" def update_display(change=None):\n",
" if not image_files:\n",
" html_widget.value = \"No images found for this level.\"\n",
" return\n",
" html_img = image_to_html(image_files[slider.value])\n",
" html_ts = f\"
for search\n",
" processed_lines.append(line)\n",
" \n",
" html_output = \"
\".join(processed_lines)\n",
" \n",
" with settings_output:\n",
" # Use + HTML for easy copy/search\n",
" display(HTML(f\"{html_output}\"))\n",
" \n",
" elif settings_dropdown.value == f\"Subset {fname}\":\n",
" with settings_output:\n",
" display(HTML(f\"{subset_text}\"))\n",
" elif settings_dropdown.value == f\"Full {fname}\":\n",
" with settings_output:\n",
" display(HTML(f\"{full_text}\"))\n",
"\n",
" \n",
" \n",
" \n",
" \"\"\"\n",
" def update_settings(change):\n",
" settings_output.clear_output()\n",
" if settings_dropdown.value == \"Nudge Params\":\n",
" processed_lines = []\n",
" for line in nudge_text.splitlines():\n",
" #for key in set(link_dict.keys()).union(tooltip_dict.keys()): #use as an intersection of both dict kyes\n",
" for key in tooltip_dict.keys():\n",
" #match = next((k for k in tooltip_dict if k.upper() == key.upper()), None)\n",
" #if k.upper() == key\n",
" if key.lower() in line:\n",
" title = tooltip_dict.get(key, \"\")\n",
" href = link_dict.get(key, \"\")\n",
" if href:\n",
" replacement = f'{key.lower()}'\n",
" else:\n",
" replacement = f'{key.lower()}'\n",
" line = line.replace(key.lower(), replacement)\n",
" processed_lines.append(line)\n",
" html_output = \"
\".join(processed_lines)\n",
" with settings_output:\n",
" display(HTML(html_output))\n",
" elif settings_dropdown.value == f\"Subset {fname}\":\n",
" with settings_output:\n",
" display(HTML(\"\" + subset_text + \"
\"))\n",
" elif settings_dropdown.value == f\"Full {fname}\":\n",
" with settings_output:\n",
" display(HTML(\"\" + full_text + \"
\"))\n",
" \"\"\"\n",
"\n",
" def update_status(change):\n",
" with status_output:\n",
" status_output.clear_output()\n",
" if status_dropdown.value == \"CaseStatus\":\n",
" print(status_text)\n",
"\n",
" slider.observe(update_display, names='value')\n",
" settings_dropdown.observe(update_settings, names='value')\n",
" status_dropdown.observe(update_status, names='value')\n",
" level_dropdown.observe(on_level_change, names='value')\n",
"\n",
" # Layout\n",
" settings_output.layout = Layout(margin='0 20px 0 0')\n",
" status_output.layout = Layout(margin='0 0 0 20px')\n",
" output_row = widgets.HBox([settings_output, status_output])\n",
" dropdown_row = widgets.HBox([settings_dropdown, status_dropdown], layout=Layout(margin='10px 0 10px 0'))\n",
" control_row = widgets.HBox([level_dropdown, slider])\n",
" title = widgets.HTML(\n",
" value=f\"{case_name}
\"\n",
" )\n",
" ui = widgets.VBox([title, control_row, html_widget, dropdown_row, output_row])\n",
"\n",
" #display(ui)\n",
" #update_display()\n",
"\n",
" update_display()\n",
" return ui\n"
]
},
{
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"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"[]\n",
"['2018-02-19 17:00', '2018-02-19 18:00', '2018-02-19 19:00', '2018-02-19 20:00', '2018-02-19 21:00', '2018-02-19 22:00', '2018-02-19 23:00', '2018-02-20 00:00', '2018-02-20 01:00', '2018-02-20 02:00', '2018-02-20 03:00', '2018-02-20 04:00', '2018-02-20 05:00', '2018-02-20 06:00', '2018-02-20 07:00']\n",
"[]\n",
"['2018-02-19 17:00', '2018-02-19 18:00', '2018-02-19 19:00', '2018-02-19 20:00', '2018-02-19 21:00', '2018-02-19 22:00', '2018-02-19 23:00', '2018-02-20 00:00', '2018-02-20 01:00', '2018-02-20 02:00', '2018-02-20 03:00', '2018-02-20 04:00', '2018-02-20 05:00', '2018-02-20 06:00', '2018-02-20 07:00']\n"
]
},
{
"name": "stdout",
"output_type": "stream",
"text": [
"[]\n",
"['2018-02-19 17:00', '2018-02-19 18:00', '2018-02-19 19:00', '2018-02-19 20:00', '2018-02-19 21:00', '2018-02-19 22:00', '2018-02-19 23:00', '2018-02-20 00:00', '2018-02-20 01:00', '2018-02-20 02:00', '2018-02-20 03:00', '2018-02-20 04:00', '2018-02-20 05:00', '2018-02-20 06:00', '2018-02-20 07:00']\n"
]
},
{
"data": {
"application/vnd.jupyter.widget-view+json": {
"model_id": "559e5d6dd8714a16b73e9370657a4bdc",
"version_major": 2,
"version_minor": 0
},
"text/plain": [
"Tab(children=(Tab(children=(VBox(children=(HTML(value=\"f.e21.FH…"
]
},
"metadata": {},
"output_type": "display_data"
}
],
"source": [
"import ipywidgets as widgets\n",
"from IPython.display import display\n",
"from pathlib import Path\n",
"\n",
"# ----------------------------------------------------------\n",
"# Define your case *families* and runs\n",
"# ----------------------------------------------------------\n",
"case_groups = {\n",
" \"f.e21.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull\": [\n",
" \"f.e21.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull_tau12h.001\",\n",
" \"f.e21.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull_tau24h.001\",\n",
" ],\n",
" \"f.e30_cam6_4_120.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull_withCOSP\": [\n",
" \"f.e30_cam6_4_120.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull_withCOSP_tau6h.001\",\n",
" #\"f.e30_cam6_4_120.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull_withCOSP_tau48h.001\",\n",
" ]\n",
"}\n",
"\n",
"# ----------------------------------------------------------\n",
"# Create nested tabs\n",
"# ----------------------------------------------------------\n",
"top_tabs = widgets.Tab()\n",
"\n",
"top_level_children = []\n",
"top_titles = []\n",
"for var in var_list:\n",
" plot_type = \"T\"\n",
" #file_path = Path(f\"/glade/derecho/scratch/islas/{caze}/run/atm_in\")\n",
"for case_family, run_list in case_groups.items():\n",
"\n",
" # Create sub-tab for each family\n",
" sub_tab = widgets.Tab()\n",
"\n",
" sub_children = []\n",
" sub_titles = []\n",
"\n",
" for run in run_list:\n",
" # Replace this with: widget = slider(...)\n",
" #widget = fake_slider(run)\n",
" #caze = \"f.e30_cam6_4_120.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull_withCOSP_tau6h.001\"\n",
" file_path = Path(f\"/glade/derecho/scratch/islas/{run}/run/atm_in\")\n",
" widget = slider(run,\n",
" #f\"plots/{run}/{plot_type}/ERA5/RF13/\",\n",
" compass_root,\n",
" f\"{str(file_path)}\",\n",
" #settings_list=[\"fincl\",\"mfilt\",\"nhtfrq\",\"ncdata\",\"cld\",\"cosp\"],\n",
" settings_list=[\"cosp\"],\n",
" #rdrop=\"/glade/derecho/scratch/richling/cases/F2000climo.f09_f09_mg17.window.exp.6hrInit.R13.003/CaseStatus\"\n",
" )\n",
"\n",
" sub_children.append(widget)\n",
" sub_titles.append(run)\n",
"\n",
" sub_tab.children = sub_children\n",
"\n",
" # Name the sub-tabs (each run)\n",
" for i, title in enumerate(sub_titles):\n",
" sub_tab.set_title(i, title)\n",
"\n",
" # Add subtab into top tab\n",
" top_level_children.append(sub_tab)\n",
" top_titles.append(case_family)\n",
"\n",
"# Assign to top-level tab\n",
"top_tabs.children = top_level_children\n",
"\n",
"# Name top-level tabs (each case family)\n",
"for i, title in enumerate(top_titles):\n",
" top_tabs.set_title(i, title)\n",
"\n",
"display(top_tabs)\n"
]
},
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"%%html\n",
"\n",
"\n",
"\n",
"\n",
" \n",
" \n",
"\n",
" \n",
" \n",
"\n",
" \n",
"\n",
" \n",
" Run 1 content
\n",
" You can inject HTML here (images, case settings, anything).
\n",
" \n",
"\n",
" \n",
" Run 2 content
\n",
" \n",
"\n",
" \n",
"\n",
" \n",
" \n",
"\n",
" \n",
"\n",
" \n",
" Run 3 content
\n",
" \n",
"\n",
" \n",
" Run 4 content
\n",
" \n",
" \n",
"\n",
"\n",
"\n",
"\n"
]
},
{
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"slide_type": ""
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"tags": [
"parameters",
"hide-cell"
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"source": [
"from IPython.display import HTML, display\n",
"import os, re, json\n",
"from glob import glob\n",
"from PIL import Image\n",
"from io import BytesIO\n",
"import base64\n",
"from html import escape\n",
"\n",
"def build_slider_html(case_name, image_dir, ldrop=None, settings_list=None, rdrop=None):\n",
" \"\"\"\n",
" Convert your slider(...) to a pure HTML/CSS/JS blob returned as IPython.display.HTML.\n",
" - case_name: string\n",
" - image_dir: directory containing images named like ..._hPa.png and with timestamps after 'hPa_'\n",
" - ldrop: path to user_nl (optional)\n",
" - settings_list: list of additional keywords to include in subset (optional)\n",
" - rdrop: path to CaseStatus (optional)\n",
" \"\"\"\n",
" # --- tooltip / link dicts from your function ---\n",
" tooltip_dict = {\n",
" \"Nudge_Uprof\": \"\"\"Selectively apply nudging to U:\n",
"\n",
"OFF = Switch off nudging\n",
"ON = Apply nudging everywhere\n",
"WINDOW = Apply window function to\n",
"nudging tendencies.\n",
"\n",
"0 = OFF\n",
"1 = ON\n",
"2 = WINDOW\n",
"\"\"\",\n",
" \"Nudge_Ucoef\": \"Selectively adjust the nudging strength applied to U. (normalized) [0.,1.]\",\n",
" \"Nudge_Hwin_lat0\": \"Specify the horizontal center of the window (lat0) in degrees. [-90., +90.]\",\n",
" \"Nudge_Hwin_lon0\": \"Specify the horizontal center of the window (lon0) in degrees. [ 0. , 360.]\",\n",
" \"Nudge_Hwin_latWidth\": \"Specify the lat width of the horizontal window in degrees. >0\",\n",
" \"Nudge_Hwin_lonWidth\": \"Specify the lon width of the horizontal window in degrees. >0\",\n",
" \"Nudge_Vwin_Hindex\": \"Vertical window high index\",\n",
" \"Nudge_Vwin_Lindex\": \"Vertical window low index\",\n",
" \"Nudge_Vwin_Hdelta\": \"Vertical window high delta\",\n",
" \"Nudge_Vwin_Ldelta\": \"Vertical window low delta\",\n",
" \"Nudge_Vwin_Invert\": \"A logical flag used to invert the horizontal window function to get its compliment. True/False\",\n",
" \"Nudge_Hwin_latDelta\": \"Horizontal lat delta\",\n",
" \"Nudge_Hwin_lonDelta\": \"Horizontal lon delta\",\n",
" \"Nudge_Hwin_Invert\": \"A logical flag used to invert the horizontal window function to get its compliment. (e.g. to nudge outside a given window) True/False\",\n",
" \"Nudge_TimeScale_Opt\": \"Select the timescale for the relaxation: WEAK / STRONG (0=WEAK,1=STRONG)\",\n",
" \"Nudge_Force_Opt\": \"Select the form of the Target values: NEXT / LINEAR (0=NEXT,1=LINEAR)\"\n",
" }\n",
"\n",
" link_dict = {\n",
" \"Nudge_Uprof\": \"https://ncar.github.io/CAM/doc/build/html/users_guide/physics-modifications-via-the-namelist.html?highlight=nudge#namelist-values\",\n",
" \"Nudge_Ucoef\": \"https://ncar.github.io/CAM/doc/build/html/users_guide/physics-modifications-via-the-namelist.html?highlight=nudge#namelist-values\",\n",
" \"Nudge_TimeScale_Opt\": \"https://www.google.com\"\n",
" }\n",
"\n",
" # --- guard ---\n",
" if not image_dir or not os.path.isdir(image_dir):\n",
" return HTML(f\"No valid image_dir: {escape(str(image_dir))}\")\n",
"\n",
" # --- detect levels and image files per level ---\n",
" lev_pattern = re.compile(r'(\\d+)hPa\\.png$')\n",
" all_files = os.listdir(image_dir)\n",
" levels = sorted({lev_pattern.search(f).group(1) for f in all_files if lev_pattern.search(f)})\n",
" if not levels:\n",
" return HTML(\"No level-specific image files found (expecting '*hPa.png').\")\n",
"\n",
" # helper to extract timestamp like your original code\n",
" timestamp_pattern = re.compile(r\"hPa_(\\d{4}_\\d{2}_\\d{2}_\\d{2}:\\d{2})\\.png$\")\n",
"\n",
" def get_images_for_level(level):\n",
" level = str(level)\n",
" level_files = sorted([\n",
" os.path.join(image_dir, f) for f in os.listdir(image_dir)\n",
" if f.endswith(f'{level}hPa.png')\n",
" ])\n",
" timestamps = [\n",
" '-'.join(os.path.basename(f).split('_')[1:4]) + ' ' + os.path.basename(f).split('_')[4]\n",
" for f in level_files\n",
" ]\n",
" return level_files, timestamps\n",
"\n",
" # --- build base64-encoded images per level (list of lists) ---\n",
" images_per_level = {}\n",
" timestamps_per_level = {}\n",
" for lev in levels:\n",
" files, tss = get_images_for_level(lev)\n",
" b64_list = []\n",
" for p in files:\n",
" try:\n",
" img = Image.open(p)\n",
" # keep aspect similar to your original resize (1000x300) but scale if smaller\n",
" #img = img.resize((1000, 300))\n",
" img = img.resize((1200, 400))\n",
" buf = BytesIO()\n",
" img.save(buf, format='PNG')\n",
" b64 = base64.b64encode(buf.getvalue()).decode()\n",
" b64_list.append(b64)\n",
" except Exception as e:\n",
" b64_list.append(\"\") # placeholder if something fails\n",
" images_per_level[lev] = b64_list\n",
" timestamps_per_level[lev] = tss\n",
"\n",
" # --- load and process settings and status text like your original functions ---\n",
" def load_user_nl(ldrop, settings_list):\n",
" default_setting_list = [\"fincl\",\"mfilt\",\"nhtfrq\",\"ncdata\"]\n",
" lines_nudged = []\n",
" lines_all = []\n",
" lines_subset = []\n",
" try:\n",
" with open(ldrop, 'r') as file:\n",
" for line in file:\n",
" if line.startswith(' Nudge_') or line.startswith(' nudge_') or line.startswith('Nudge_') or line.startswith('nudge_'):\n",
" cleaned_line = re.sub(r'\\s{3,}', ' ', line)\n",
" lines_subset.append(cleaned_line.strip())\n",
" lines_nudged.append(cleaned_line.strip())\n",
" if settings_list:\n",
" for setting in settings_list:\n",
" if setting not in default_setting_list:\n",
" if setting in line:\n",
" cleaned_line = re.sub(r'\\s{3,}', ' ', line)\n",
" lines_subset.append(cleaned_line.strip())\n",
" if \"fincl\" in line:\n",
" cleaned_line = re.sub(r'\\s{3,}', ' ', line.strip())\n",
" lines_subset.append(cleaned_line)\n",
" if \"mfilt\" in line:\n",
" cleaned_line = re.sub(r'\\s{3,}', ' ', line)\n",
" lines_subset.append(cleaned_line.strip())\n",
" if \"nhtfrq\" in line:\n",
" cleaned_line = re.sub(r'\\s{3,}', ' ', line)\n",
" lines_subset.append(cleaned_line.strip())\n",
" if \"ncdata\" in line:\n",
" cleaned_line = re.sub(r'\\s{3,}', ' ', line)\n",
" lines_subset.append(cleaned_line.strip())\n",
" lines_all.append(line.strip())\n",
" except Exception as e:\n",
" lines_all = [f\"Error reading user_nl_cam: {e}\"]\n",
" return \"\\n\".join(lines_nudged), \"\\n\".join(lines_all), \"\\n\".join(lines_subset)\n",
"\n",
" def load_case_status(case_status):\n",
" lines = []\n",
" try:\n",
" with open(case_status, 'r') as file:\n",
" lines = [re.sub(r'\\s{3,}', ' ', line).strip() for line in file]\n",
" except Exception as e:\n",
" lines = [f\"Error reading CaseStatus: {e}\"]\n",
" return \"\\n\".join(lines)\n",
"\n",
" ldrop_opts = [\"Hide Settings\", \"Nudge Params\"]\n",
" fname = \"\"\n",
" nudge_text = full_text = subset_text = \"\"\n",
" if ldrop and os.path.isfile(ldrop):\n",
" nudge_text, full_text, subset_text = load_user_nl(ldrop, settings_list)\n",
" if \"atm_in\" in ldrop:\n",
" ldrop_opts += [\"Full atm_in\", \"Subset atm_in\"]\n",
" fname = \"atm_in\"\n",
" if \"user_nl_cam\" in ldrop:\n",
" ldrop_opts.append(\"Full user_nl_cam\")\n",
" fname = \"user_nl_cam\"\n",
"\n",
" if rdrop and os.path.isfile(rdrop):\n",
" status_text = load_case_status(rdrop)\n",
" else:\n",
" status_text = \"Nothing here...\"\n",
"\n",
" # --- sanitized HTML snippets ready for insertion (escape content except where we want HTML links) ---\n",
" # For settings Nudge Params we will replace keys with or including title attributes.\n",
" def process_nudge_html(text):\n",
" lines = []\n",
" for line in text.splitlines():\n",
" original = line\n",
" for key in tooltip_dict.keys():\n",
" pattern = re.compile(re.escape(key), re.IGNORECASE)\n",
" title = tooltip_dict.get(key, \"\")\n",
" href = link_dict.get(key, \"\")\n",
" if href:\n",
" repl = f'{escape(key)}'\n",
" else:\n",
" repl = f'{escape(key)}'\n",
" line = pattern.sub(repl, line)\n",
" # escape leftover content\n",
" # we assume replacements already escaped; ensure any other characters are safe\n",
" lines.append(escape(line, quote=False))\n",
" # join with
and then unescape the already-constructed / by replacing their escaped forms\n",
" html_out = \"
\".join(lines)\n",
" # fix the escaped and by unescaping their tags (they were double-escaped)\n",
" # (we purposely escaped the full line earlier — now restore tags)\n",
" for key in tooltip_dict.keys():\n",
" # replace the escaped anchor/span (they contain <a ... >) with actual tags by searching for the escaped substring\n",
" if key in html_out:\n",
" # anchors contain the key text; replace the escaped key-only instances with unescaped link/span\n",
" # This step is conservative and will mainly restore our inserted tags.\n",
" pass\n",
" # simpler: since we already constructed repl with proper tags and then escaped the whole line,\n",
" # we need to instead rebuild from original again but carefully:\n",
" processed = []\n",
" for line in text.splitlines():\n",
" line2 = line\n",
" for key in tooltip_dict.keys():\n",
" pattern = re.compile(re.escape(key), re.IGNORECASE)\n",
" title = tooltip_dict.get(key, \"\")\n",
" href = link_dict.get(key, \"\")\n",
" if href:\n",
" repl = f'{escape(key)}'\n",
" else:\n",
" repl = f'{escape(key)}'\n",
" line2 = pattern.sub(repl, line2)\n",
" processed.append(escape(line2))\n",
" # Now processed contains escaped content with tags escaped; we must insert the tags verbatim.\n",
" # So we'll take the original lines and perform the substitution without escaping the replacements.\n",
" final_lines = []\n",
" for line in text.splitlines():\n",
" ln = line\n",
" for key in tooltip_dict.keys():\n",
" pattern = re.compile(re.escape(key), re.IGNORECASE)\n",
" title = tooltip_dict.get(key, \"\")\n",
" href = link_dict.get(key, \"\")\n",
" if href:\n",
" repl = f'{escape(key)}'\n",
" else:\n",
" repl = f'{escape(key)}'\n",
" ln = pattern.sub(repl, ln)\n",
" final_lines.append(escape(ln))\n",
" # convert to HTML with styling preserved\n",
" return \"\" + \"
\".join(final_lines) + \"
\"\n",
"\n",
" nudge_html = process_nudge_html(nudge_text) if nudge_text else \"No nudge params found.\"\n",
" subset_html = \"\" + escape(subset_text) + \"
\" if subset_text else \"No subset.\"\n",
" full_html = \"\" + escape(full_text) + \"
\" if full_text else \"No full text.\"\n",
" status_html = \"\" + escape(status_text) + \"
\"\n",
"\n",
" # --- Build an HTML blob and inject JSON data for JS ---\n",
" data = {\n",
" \"case_name\": case_name,\n",
" \"levels\": levels,\n",
" \"images_per_level\": images_per_level,\n",
" \"timestamps_per_level\": timestamps_per_level,\n",
" \"nudge_html\": nudge_html,\n",
" \"subset_html\": subset_html,\n",
" \"full_html\": full_html,\n",
" \"status_html\": status_html,\n",
" \"ldrop_opts\": ldrop_opts,\n",
" \"fname\": fname\n",
" }\n",
"\n",
" # Convert data to JSON safely for embedding\n",
" data_json = json.dumps(data)\n",
"\n",
" # HTML/CSS/JS template\n",
" html = f\"\"\"\n",
"\n",
"\n",
"\n",
" \"\"\"\n",
"\n",
" return HTML(html)\n",
"\n",
"# Example usage:\n",
"# display(build_slider_html(\"CASE_NAME\", \"/path/to/images\", ldrop=\"/path/to/user_nl_cam\", settings_list=[\"cosp\"], rdrop=\"/path/to/CaseStatus\"))\n",
"\"\"\"\n",
"\"f.e21.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull\": [\n",
" \"f.e21.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull_tau12h.001\",\n",
" \"f.e21.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull_tau24h.001\",\n",
" ],\n",
"\"\"\"\n",
"from pathlib import Path\n",
"run = \"f.e21.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull_tau12h.001\"\n",
"#for run in [\"f.e21.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull_tau12h.001\", \n",
"# \"f.e21.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfull_tau24h.001\"]:\n",
"file_path = Path(f\"/glade/derecho/scratch/islas/{run}/run/atm_in\")\n",
"display(build_slider_html(run,\n",
" #f\"plots/{run}/{plot_type}/ERA5/RF13/\",\n",
" compass_root,\n",
" f\"{str(file_path)}\",\n",
" #settings_list=[\"fincl\",\"mfilt\",\"nhtfrq\",\"ncdata\",\"cld\",\"cosp\"],\n",
" settings_list=[\"cosp\"],\n",
" #rdrop=\"/glade/derecho/scratch/richling/cases/F2000climo.f09_f09_mg17.window.exp.6hrInit.R13.003/CaseStatus\"\n",
" )\n",
")"
]
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"source": [
"#GOOD FUNCTION\n",
"from IPython.display import HTML, display\n",
"import os, re, json\n",
"from glob import glob\n",
"from PIL import Image\n",
"from io import BytesIO\n",
"import base64\n",
"from html import escape\n",
"\n",
"def build_slider_html(case_name, image_dir, ldrop=None, settings_list=None, rdrop=None):\n",
" \"\"\"\n",
" Convert your slider(...) to a pure HTML/CSS/JS blob returned as IPython.display.HTML.\n",
" - case_name: string\n",
" - image_dir: directory containing images named like ..._hPa.png and with timestamps after 'hPa_'\n",
" - ldrop: path to user_nl (optional)\n",
" - settings_list: list of additional keywords to include in subset (optional)\n",
" - rdrop: path to CaseStatus (optional)\n",
" \"\"\"\n",
" # --- tooltip / link dicts from your function ---\n",
" tooltip_dict = {\n",
" \"Nudge_Uprof\": \"\"\"Selectively apply nudging to U:\n",
"\n",
"OFF = Switch off nudging\n",
"ON = Apply nudging everywhere\n",
"WINDOW = Apply window function to\n",
"nudging tendencies.\n",
"\n",
"0 = OFF\n",
"1 = ON\n",
"2 = WINDOW\n",
"\"\"\",\n",
" \"Nudge_Ucoef\": \"Selectively adjust the nudging strength applied to U. (normalized) [0.,1.]\",\n",
" \"Nudge_Hwin_lat0\": \"Specify the horizontal center of the window (lat0) in degrees. [-90., +90.]\",\n",
" \"Nudge_Hwin_lon0\": \"Specify the horizontal center of the window (lon0) in degrees. [ 0. , 360.]\",\n",
" \"Nudge_Hwin_latWidth\": \"Specify the lat width of the horizontal window in degrees. >0\",\n",
" \"Nudge_Hwin_lonWidth\": \"Specify the lon width of the horizontal window in degrees. >0\",\n",
" \"Nudge_Vwin_Hindex\": \"Vertical window high index\",\n",
" \"Nudge_Vwin_Lindex\": \"Vertical window low index\",\n",
" \"Nudge_Vwin_Hdelta\": \"Vertical window high delta\",\n",
" \"Nudge_Vwin_Ldelta\": \"Vertical window low delta\",\n",
" \"Nudge_Vwin_Invert\": \"A logical flag used to invert the horizontal window function to get its compliment. True/False\",\n",
" \"Nudge_Hwin_latDelta\": \"Horizontal lat delta\",\n",
" \"Nudge_Hwin_lonDelta\": \"Horizontal lon delta\",\n",
" \"Nudge_Hwin_Invert\": \"A logical flag used to invert the horizontal window function to get its compliment. (e.g. to nudge outside a given window) True/False\",\n",
" \"Nudge_TimeScale_Opt\": \"Select the timescale for the relaxation: WEAK / STRONG (0=WEAK,1=STRONG)\",\n",
" \"Nudge_Force_Opt\": \"Select the form of the Target values: NEXT / LINEAR (0=NEXT,1=LINEAR)\"\n",
" }\n",
"\n",
" link_dict = {\n",
" \"Nudge_Uprof\": \"https://ncar.github.io/CAM/doc/build/html/users_guide/physics-modifications-via-the-namelist.html?highlight=nudge#namelist-values\",\n",
" \"Nudge_Ucoef\": \"https://ncar.github.io/CAM/doc/build/html/users_guide/physics-modifications-via-the-namelist.html?highlight=nudge#namelist-values\",\n",
" \"Nudge_TimeScale_Opt\": \"https://www.google.com\"\n",
" }\n",
"\n",
" # --- guard ---\n",
" if not image_dir or not os.path.isdir(image_dir):\n",
" return HTML(f\"No valid image_dir: {escape(str(image_dir))}\")\n",
"\n",
" # --- detect levels and image files per level ---\n",
" lev_pattern = re.compile(r'(\\d+)hPa\\.png$')\n",
" all_files = os.listdir(image_dir)\n",
" levels = sorted({lev_pattern.search(f).group(1) for f in all_files if lev_pattern.search(f)})\n",
" if not levels:\n",
" return HTML(\"No level-specific image files found (expecting '*hPa.png').\")\n",
"\n",
" # helper to extract timestamp like your original code\n",
" timestamp_pattern = re.compile(r\"hPa_(\\d{4}_\\d{2}_\\d{2}_\\d{2}:\\d{2})\\.png$\")\n",
"\n",
" def get_images_for_level(level):\n",
" level = str(level)\n",
" level_files = sorted([\n",
" os.path.join(image_dir, f) for f in os.listdir(image_dir)\n",
" if f.endswith(f'{level}hPa.png')\n",
" ])\n",
" timestamps = [\n",
" '-'.join(os.path.basename(f).split('_')[1:4]) + ' ' + os.path.basename(f).split('_')[4]\n",
" for f in level_files\n",
" ]\n",
" return level_files, timestamps\n",
"\n",
" # --- build base64-encoded images per level (list of lists) ---\n",
" images_per_level = {}\n",
" timestamps_per_level = {}\n",
" for lev in levels:\n",
" files, tss = get_images_for_level(lev)\n",
" b64_list = []\n",
" for p in files:\n",
" try:\n",
" img = Image.open(p)\n",
" # keep aspect similar to your original resize (1000x300) but scale if smaller\n",
" #img = img.resize((1000, 300))\n",
" img = img.resize((1200, 400))\n",
" buf = BytesIO()\n",
" img.save(buf, format='PNG')\n",
" b64 = base64.b64encode(buf.getvalue()).decode()\n",
" b64_list.append(b64)\n",
" except Exception as e:\n",
" b64_list.append(\"\") # placeholder if something fails\n",
" images_per_level[lev] = b64_list\n",
" timestamps_per_level[lev] = tss\n",
"\n",
" # --- load and process settings and status text like your original functions ---\n",
" def load_user_nl(ldrop, settings_list):\n",
" default_setting_list = [\"fincl\",\"mfilt\",\"nhtfrq\",\"ncdata\"]\n",
" lines_nudged = []\n",
" lines_all = []\n",
" lines_subset = []\n",
" try:\n",
" with open(ldrop, 'r') as file:\n",
" for line in file:\n",
" if line.startswith(' Nudge_') or line.startswith(' nudge_') or line.startswith('Nudge_') or line.startswith('nudge_'):\n",
" cleaned_line = re.sub(r'\\s{3,}', ' ', line)\n",
" lines_subset.append(cleaned_line.strip())\n",
" lines_nudged.append(cleaned_line.strip())\n",
" if settings_list:\n",
" for setting in settings_list:\n",
" if setting not in default_setting_list:\n",
" if setting in line:\n",
" cleaned_line = re.sub(r'\\s{3,}', ' ', line)\n",
" lines_subset.append(cleaned_line.strip())\n",
" if \"fincl\" in line:\n",
" cleaned_line = re.sub(r'\\s{3,}', ' ', line.strip())\n",
" lines_subset.append(cleaned_line)\n",
" if \"mfilt\" in line:\n",
" cleaned_line = re.sub(r'\\s{3,}', ' ', line)\n",
" lines_subset.append(cleaned_line.strip())\n",
" if \"nhtfrq\" in line:\n",
" cleaned_line = re.sub(r'\\s{3,}', ' ', line)\n",
" lines_subset.append(cleaned_line.strip())\n",
" if \"ncdata\" in line:\n",
" cleaned_line = re.sub(r'\\s{3,}', ' ', line)\n",
" lines_subset.append(cleaned_line.strip())\n",
" lines_all.append(line.strip())\n",
" except Exception as e:\n",
" lines_all = [f\"Error reading user_nl_cam: {e}\"]\n",
" return \"\\n\".join(lines_nudged), \"\\n\".join(lines_all), \"\\n\".join(lines_subset)\n",
"\n",
" def load_case_status(case_status):\n",
" lines = []\n",
" try:\n",
" with open(case_status, 'r') as file:\n",
" lines = [re.sub(r'\\s{3,}', ' ', line).strip() for line in file]\n",
" except Exception as e:\n",
" lines = [f\"Error reading CaseStatus: {e}\"]\n",
" return \"\\n\".join(lines)\n",
"\n",
" ldrop_opts = [\"Hide Settings\", \"Nudge Params\"]\n",
" fname = \"\"\n",
" nudge_text = full_text = subset_text = \"\"\n",
" if ldrop and os.path.isfile(ldrop):\n",
" nudge_text, full_text, subset_text = load_user_nl(ldrop, settings_list)\n",
" if \"atm_in\" in ldrop:\n",
" ldrop_opts += [\"Full atm_in\", \"Subset atm_in\"]\n",
" fname = \"atm_in\"\n",
" if \"user_nl_cam\" in ldrop:\n",
" ldrop_opts.append(\"Full user_nl_cam\")\n",
" fname = \"user_nl_cam\"\n",
"\n",
" if rdrop and os.path.isfile(rdrop):\n",
" status_text = load_case_status(rdrop)\n",
" else:\n",
" status_text = \"Nothing here...\"\n",
"\n",
" # --- sanitized HTML snippets ready for insertion (escape content except where we want HTML links) ---\n",
" # For settings Nudge Params we will replace keys with or including title attributes.\n",
" def process_nudge_html(text):\n",
" lines = []\n",
" for line in text.splitlines():\n",
" original = line\n",
" for key in tooltip_dict.keys():\n",
" pattern = re.compile(re.escape(key), re.IGNORECASE)\n",
" title = tooltip_dict.get(key, \"\")\n",
" href = link_dict.get(key, \"\")\n",
" if href:\n",
" repl = f'{escape(key)}'\n",
" else:\n",
" repl = f'{escape(key)}'\n",
" line = pattern.sub(repl, line)\n",
" # escape leftover content\n",
" # we assume replacements already escaped; ensure any other characters are safe\n",
" lines.append(escape(line, quote=False))\n",
" # join with
and then unescape the already-constructed / by replacing their escaped forms\n",
" html_out = \"
\".join(lines)\n",
" # fix the escaped and by unescaping their tags (they were double-escaped)\n",
" # (we purposely escaped the full line earlier — now restore tags)\n",
" for key in tooltip_dict.keys():\n",
" # replace the escaped anchor/span (they contain <a ... >) with actual tags by searching for the escaped substring\n",
" if key in html_out:\n",
" # anchors contain the key text; replace the escaped key-only instances with unescaped link/span\n",
" # This step is conservative and will mainly restore our inserted tags.\n",
" pass\n",
" # simpler: since we already constructed repl with proper tags and then escaped the whole line,\n",
" # we need to instead rebuild from original again but carefully:\n",
" processed = []\n",
" for line in text.splitlines():\n",
" line2 = line\n",
" for key in tooltip_dict.keys():\n",
" pattern = re.compile(re.escape(key), re.IGNORECASE)\n",
" title = tooltip_dict.get(key, \"\")\n",
" href = link_dict.get(key, \"\")\n",
" if href:\n",
" repl = f'{escape(key)}'\n",
" else:\n",
" repl = f'{escape(key)}'\n",
" line2 = pattern.sub(repl, line2)\n",
" processed.append(escape(line2))\n",
" # Now processed contains escaped content with tags escaped; we must insert the tags verbatim.\n",
" # So we'll take the original lines and perform the substitution without escaping the replacements.\n",
" final_lines = []\n",
" for line in text.splitlines():\n",
" ln = line\n",
" for key in tooltip_dict.keys():\n",
" pattern = re.compile(re.escape(key), re.IGNORECASE)\n",
" title = tooltip_dict.get(key, \"\")\n",
" href = link_dict.get(key, \"\")\n",
" if href:\n",
" repl = f'{escape(key)}'\n",
" else:\n",
" repl = f'{escape(key)}'\n",
" ln = pattern.sub(repl, ln)\n",
" final_lines.append(escape(ln))\n",
" # convert to HTML with styling preserved\n",
" return \"\" + \"
\".join(final_lines) + \"
\"\n",
"\n",
" nudge_html = process_nudge_html(nudge_text) if nudge_text else \"No nudge params found.\"\n",
" subset_html = \"\" + escape(subset_text) + \"
\" if subset_text else \"No subset.\"\n",
" full_html = \"\" + escape(full_text) + \"
\" if full_text else \"No full text.\"\n",
" status_html = \"\" + escape(status_text) + \"
\"\n",
"\n",
" # --- Build an HTML blob and inject JSON data for JS ---\n",
" data = {\n",
" \"case_name\": case_name,\n",
" \"levels\": levels,\n",
" \"images_per_level\": images_per_level,\n",
" \"timestamps_per_level\": timestamps_per_level,\n",
" \"nudge_html\": nudge_html,\n",
" \"subset_html\": subset_html,\n",
" \"full_html\": full_html,\n",
" \"status_html\": status_html,\n",
" \"ldrop_opts\": ldrop_opts,\n",
" \"fname\": fname\n",
" }\n",
"\n",
" # Convert data to JSON safely for embedding\n",
" data_json = json.dumps(data)\n",
"\n",
" # HTML/CSS/JS template\n",
" html = f\"\"\"\n",
"\n",
"\n",
"\n",
" \"\"\"\n",
"\n",
" return HTML(html)"
]
},
{
"cell_type": "code",
"execution_count": 7,
"id": "34db62b6",
"metadata": {
"editable": true,
"execution": {
"iopub.execute_input": "2026-01-05T20:53:10.818446Z",
"iopub.status.busy": "2026-01-05T20:53:10.818203Z",
"iopub.status.idle": "2026-01-05T20:53:16.094896Z",
"shell.execute_reply": "2026-01-05T20:53:16.094216Z"
},
"papermill": {
"duration": 5.290518,
"end_time": "2026-01-05T20:53:16.096077",
"exception": false,
"start_time": "2026-01-05T20:53:10.805559",
"status": "completed"
},
"slideshow": {
"slide_type": ""
},
"tags": [
"parameters",
"hide-cell"
]
},
"outputs": [],
"source": [
"#GOOD FUNCTION\n",
"from IPython.display import HTML, display\n",
"from pathlib import Path\n",
"\n",
"outer_tabs_html = []\n",
"outer_tab_buttons = []\n",
"outer_content_html = []\n",
"\n",
"for i, (outer_name, inner_runs) in enumerate(runs_dict.items()):\n",
" # Outer tab button\n",
" active_cls = \"active\" if i==0 else \"\"\n",
" outer_tab_buttons.append(f'{outer_name}')\n",
"\n",
" inner_tabs = []\n",
" inner_contents = []\n",
" for j, run_name in enumerate(inner_runs):\n",
" # Inner tab button\n",
" inner_active = \"active\" if j==0 else \"\"\n",
" inner_tabs.append(f'{run_name.split(\"_\")[-1]}')\n",
"\n",
" ## Inner content: slider HTML\n",
" #slider_html = build_slider_html(\n",
" # run_name,\n",
" # image_dir=f\"/glade/derecho/scratch/islas/{run_name}/run/atm_in\",\n",
" # settings_list=[\"cosp\"],\n",
" #).data # get the raw HTML string\n",
" file_path = Path(f\"/glade/derecho/scratch/islas/{run_name}/run/atm_in\")\n",
" slider_html = build_slider_html(run_name,\n",
" #f\"plots/{run}/{plot_type}/ERA5/RF13/\",\n",
" compass_root,\n",
" f\"{str(file_path)}\",\n",
" #settings_list=[\"fincl\",\"mfilt\",\"nhtfrq\",\"ncdata\",\"cld\",\"cosp\"],\n",
" settings_list=[\"cosp\"],\n",
" #rdrop=\"/glade/derecho/scratch/richling/cases/F2000climo.f09_f09_mg17.window.exp.6hrInit.R13.003/CaseStatus\"\n",
" ).data # get the raw HTML string\n",
"\n",
" inner_contents.append(f'{slider_html}')\n",
"\n",
" outer_active = \"active\" if i==0 else \"\"\n",
" outer_content_html.append(f\"\"\"\n",
" \n",
" {''.join(inner_tabs)}\n",
" {''.join(inner_contents)}\n",
" \n",
" \"\"\")\n",
"\n",
"html_full = f\"\"\"\n",
"\n",
"{''.join(outer_tab_buttons)}\n",
"\n",
"{''.join(outer_content_html)}\n",
"\n",
"\n",
"\n",
"\n",
"\"\"\"\n",
"\n"
]
},
{
"cell_type": "code",
"execution_count": 8,
"id": "5324784d",
"metadata": {
"execution": {
"iopub.execute_input": "2026-01-05T20:53:16.110851Z",
"iopub.status.busy": "2026-01-05T20:53:16.110611Z",
"iopub.status.idle": "2026-01-05T20:53:16.219011Z",
"shell.execute_reply": "2026-01-05T20:53:16.218439Z"
},
"papermill": {
"duration": 0.22705,
"end_time": "2026-01-05T20:53:16.330483",
"exception": false,
"start_time": "2026-01-05T20:53:16.103433",
"status": "completed"
},
"tags": []
},
"outputs": [
{
"data": {
"text/html": [
"\n",
"\n",
"f.e21.FHIST_BGC.f09_f09_mg17.SOCRATES_nudgeUVTfullf.e30_cam6_4_120.FHISTC_LTso.ne30pg3_ne30pg3_mg17.SOCRATES_nudgeUVTfull_withCOSP\n",
"\n",
"\n",
" \n",
" tau12h.001tau24h.001\n",
" \n",
"\n",
"\n",
"\n",
" \n",
"\n",
"\n",
"\n",
" \n",
" \n",
"\n",
" \n",
" tau6h.001tau12h.001\n",
" \n",
"\n",
"\n",
"\n",
" \n",
"\n",
"\n",
"\n",
" \n",
" \n",
"\n",
"\n",
"\n",
"\n",
"\n"
],
"text/plain": [
""
]
},
"metadata": {},
"output_type": "display_data"
}
],
"source": [
"display(HTML(html_full))"
]
},
{
"cell_type": "raw",
"id": "9a39ea6c",
"metadata": {
"papermill": {
"duration": 0.092317,
"end_time": "2026-01-05T20:53:16.511661",
"exception": false,
"start_time": "2026-01-05T20:53:16.419344",
"status": "completed"
},
"tags": [],
"vscode": {
"languageId": "raw"
}
},
"source": [
"from IPython.display import HTML, display\n",
"\n",
"\n",
"# Build HTML\n",
"outer_options = \"\".join([f'' for i, name in enumerate(runs_dict.keys())])\n",
"\n",
"outer_contents = []\n",
"for i, (outer_name, inner_runs) in enumerate(runs_dict.items()):\n",
" inner_tabs_html = []\n",
" inner_contents_html = []\n",
" for j, run_name in enumerate(inner_runs):\n",
" active_cls = \"active\" if j==0 else \"\"\n",
" # Inner tab button\n",
" inner_tabs_html.append(f'{run_name.split(\"_\")[-1]}')\n",
" # Inner content: embed your slider HTML\n",
" slider_html = build_slider_html(run_name,\n",
" #f\"plots/{run}/{plot_type}/ERA5/RF13/\",\n",
" compass_root,\n",
" f\"{str(file_path)}\",\n",
" #settings_list=[\"fincl\",\"mfilt\",\"nhtfrq\",\"ncdata\",\"cld\",\"cosp\"],\n",
" settings_list=[\"cosp\"],\n",
" #rdrop=\"/glade/derecho/scratch/richling/cases/F2000climo.f09_f09_mg17.window.exp.6hrInit.R13.003/CaseStatus\"\n",
" ).data # extract HTML string\n",
" inner_contents_html.append(f'{slider_html}')\n",
"\n",
" outer_active = \"active\" if i==0 else \"\"\n",
" outer_contents.append(f\"\"\"\n",
" \n",
" {''.join(inner_tabs_html)}\n",
" {''.join(inner_contents_html)}\n",
" \n",
" \"\"\")\n",
"\n",
"html_full = f\"\"\"\n",
"\n",
" \n",
" \n",
"\n",
" {''.join(outer_contents)}\n",
"\n",
"\n",
"\n",
"\n",
"\n",
"\"\"\"\n",
"\n",
"display(HTML(html_full))\n"
]
},
{
"cell_type": "raw",
"id": "66abeb9e",
"metadata": {
"papermill": {
"duration": 0.087315,
"end_time": "2026-01-05T20:53:16.687138",
"exception": false,
"start_time": "2026-01-05T20:53:16.599823",
"status": "completed"
},
"tags": [],
"vscode": {
"languageId": "raw"
}
},
"source": [
"from IPython.display import HTML, display\n",
"import os, re, json\n",
"from glob import glob\n",
"from PIL import Image\n",
"from io import BytesIO\n",
"import base64\n",
"from html import escape\n",
"from pathlib import Path\n",
"\n",
"def build_slider_html_multi(run_families, compass_root, base_path, settings_list=None):\n",
" \"\"\"\n",
" Build a slider widget with outer dropdown (run families) and inner tabs (runs within family)\n",
" \n",
" run_families: dict\n",
" {\"family_name1\": [\"run1\",\"run2\"], \"family_name2\": [\"run3\",\"run4\"]}\n",
" base_path: str or Path\n",
" Base path where runs are located (will append /run/atm_in)\n",
" settings_list: list of strings (optional)\n",
" \"\"\"\n",
" \n",
" # --- helper functions from your previous function ---\n",
" \n",
" tooltip_dict = {\n",
" \"Nudge_Uprof\": \"Selectively apply nudging to U\",\n",
" \"Nudge_Ucoef\": \"Selectively adjust the nudging strength applied to U. (normalized) [0.,1.]\",\n",
" \"Nudge_Hwin_lat0\": \"Specify the horizontal center of the window (lat0) in degrees. [-90., +90.]\",\n",
" \"Nudge_Hwin_lon0\": \"Specify the horizontal center of the window (lon0) in degrees. [ 0. , 360.]\",\n",
" \"Nudge_Hwin_latWidth\": \"Specify the lat width of the horizontal window in degrees. >0\",\n",
" \"Nudge_Hwin_lonWidth\": \"Specify the lon width of the horizontal window in degrees. >0\",\n",
" \"Nudge_Vwin_Hindex\": \"Vertical window high index\",\n",
" \"Nudge_Vwin_Lindex\": \"Vertical window low index\",\n",
" \"Nudge_Vwin_Hdelta\": \"Vertical window high delta\",\n",
" \"Nudge_Vwin_Ldelta\": \"Vertical window low delta\",\n",
" \"Nudge_Vwin_Invert\": \"A logical flag used to invert the horizontal window function to get its compliment. True/False\",\n",
" \"Nudge_Hwin_latDelta\": \"Horizontal lat delta\",\n",
" \"Nudge_Hwin_lonDelta\": \"Horizontal lon delta\",\n",
" \"Nudge_Hwin_Invert\": \"A logical flag used to invert the horizontal window function to get its compliment. (e.g. to nudge outside a given window) True/False\",\n",
" \"Nudge_TimeScale_Opt\": \"Select the timescale for the relaxation: WEAK / STRONG (0=WEAK,1=STRONG)\",\n",
" \"Nudge_Force_Opt\": \"Select the form of the Target values: NEXT / LINEAR (0=NEXT,1=LINEAR)\"\n",
" }\n",
"\n",
" link_dict = {\n",
" \"Nudge_Uprof\": \"https://ncar.github.io/CAM/doc/build/html/users_guide/physics-modifications-via-the-namelist.html?highlight=nudge#namelist-values\",\n",
" \"Nudge_Ucoef\": \"https://ncar.github.io/CAM/doc/build/html/users_guide/physics-modifications-via-the-namelist.html?highlight=nudge#namelist-values\",\n",
" \"Nudge_TimeScale_Opt\": \"https://www.google.com\"\n",
" }\n",
"\n",
" def process_nudge_html(text):\n",
" lines = []\n",
" for line in text.splitlines():\n",
" line2 = line\n",
" for key in tooltip_dict.keys():\n",
" pattern = re.compile(re.escape(key), re.IGNORECASE)\n",
" title = tooltip_dict.get(key, \"\")\n",
" href = link_dict.get(key, \"\")\n",
" if href:\n",
" repl = f'{escape(key)}'\n",
" else:\n",
" repl = f'{escape(key)}'\n",
" line2 = pattern.sub(repl, line2)\n",
" lines.append(escape(line2))\n",
" return \"\" + \"
\".join(lines) + \"
\"\n",
"\n",
" def load_user_nl(ldrop):\n",
" lines_nudged = []\n",
" try:\n",
" with open(ldrop, 'r') as file:\n",
" for line in file:\n",
" if line.startswith(' Nudge_') or line.startswith('nudge_'):\n",
" lines_nudged.append(line.strip())\n",
" except Exception as e:\n",
" lines_nudged = [f\"Error reading user_nl_cam: {e}\"]\n",
" return \"\\n\".join(lines_nudged)\n",
"\n",
" def get_images(compass_root):\n",
" lev_pattern = re.compile(r'(\\d+)hPa\\.png$')\n",
" timestamp_pattern = re.compile(r\"hPa_(\\d{4}_\\d{2}_\\d{2}_\\d{2}:\\d{2})\\.png$\")\n",
" if not os.path.isdir(compass_root):\n",
" return [], [], []\n",
" files = sorted(os.listdir(compass_root))\n",
" levels = sorted({lev_pattern.search(f).group(1) for f in files if lev_pattern.search(f)})\n",
" images_per_level = {}\n",
" timestamps_per_level = {}\n",
" for lev in levels:\n",
" level_files = sorted([os.path.join(compass_root, f) for f in files if f.endswith(f\"{lev}hPa.png\")])\n",
" tss = []\n",
" b64_list = []\n",
" for f in level_files:\n",
" # timestamp\n",
" ts_m = timestamp_pattern.search(f)\n",
" tss.append(ts_m.group(1) if ts_m else \"NoTS\")\n",
" # image\n",
" try:\n",
" img = Image.open(f)\n",
" img = img.resize((1200,400))\n",
" buf = BytesIO()\n",
" img.save(buf, format='PNG')\n",
" b64_list.append(base64.b64encode(buf.getvalue()).decode())\n",
" except:\n",
" b64_list.append(\"\")\n",
" images_per_level[lev] = b64_list\n",
" timestamps_per_level[lev] = tss\n",
" return levels, images_per_level, timestamps_per_level\n",
"\n",
" # --- Build data structure for all runs ---\n",
" all_data = {}\n",
" slider_count = 0 # to generate unique ID prefixes\n",
" for fam_name, run_list in run_families.items():\n",
" all_data[fam_name] = {}\n",
" for run_name in run_list:\n",
" run_path = Path(base_path)/run_name/\"run\"/\"atm_in\"\n",
" levels, images_per_level, timestamps_per_level = get_images(str(compass_root))\n",
" # Load nudge params if exist\n",
" ldrop = run_path # just as example\n",
" nudge_text = load_user_nl(str(run_path/\"user_nl_cam\")) if (run_path/\"user_nl_cam\").exists() else \"\"\n",
" data = {\n",
" \"case_name\": run_name,\n",
" \"levels\": levels,\n",
" \"images_per_level\": images_per_level,\n",
" \"timestamps_per_level\": timestamps_per_level,\n",
" \"nudge_html\": process_nudge_html(nudge_text),\n",
" \"ldrop_opts\": [\"Hide Settings\",\"Nudge Params\"],\n",
" \"slider_id\": f\"slider_{slider_count}\"\n",
" }\n",
" all_data[fam_name][run_name] = data\n",
" slider_count += 1\n",
"\n",
" data_json = json.dumps(all_data)\n",
"\n",
" # --- HTML/JS template ---\n",
" html = f\"\"\"\n",
"\n",
" \n",
" \n",
" \n",
"\n",
"\n",
"\n",
" \"\"\"\n",
" return HTML(html)\n",
"compass_root,\n",
"#f\"{str(file_path)}\",\n",
"display(build_slider_html_multi(runs_dict, compass_root, f\"{str(file_path)}\", settings_list=[\"cosp\"]))"
]
},
{
"cell_type": "raw",
"id": "89d3acce",
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"from IPython.display import HTML, display\n",
"from pathlib import Path\n",
"\n",
"def build_slider_dropdown(runs_dict, compass_root, base_path=None, settings_list=None):\n",
" \"\"\"\n",
" runs_dict: {\"Family1\": [\"Run1\", \"Run2\"], ...}\n",
" compass_root: Path to PNG images for all runs\n",
" base_path: optional base path to /run/atm_in (for ldrop/rdrop)\n",
" settings_list: list of settings keywords to pass to build_slider_html\n",
" \"\"\"\n",
" outer_options = \"\".join([f'' \n",
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"\n",
" outer_contents = []\n",
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" inner_tabs_html = []\n",
" inner_contents_html = []\n",
" for j, run_name in enumerate(inner_runs):\n",
" active_cls = \"active\" if j == 0 else \"\"\n",
" # Inner tab button\n",
" inner_tabs_html.append(\n",
" f''\n",
" f'{run_name.split(\"_\")[-1]}'\n",
" )\n",
"\n",
" # optional ldrop/rdrop path\n",
" file_path = Path(f\"/glade/derecho/scratch/islas/{run_name}/run/atm_in\")\n",
" #ldrop_path = Path(base_path) / run_name / \"run\" / \"atm_in\" if base_path else None\n",
" ldrop_path = str(file_path) if file_path else None\n",
"\n",
" # embed slider HTML for this run\n",
" slider_html = build_slider_html(\n",
" run_name,\n",
" compass_root,\n",
" ldrop=ldrop_path,\n",
" settings_list=settings_list\n",
" ).data\n",
" inner_contents_html.append(\n",
" f'{slider_html}'\n",
" )\n",
"\n",
" outer_active = \"active\" if i == 0 else \"\"\n",
" outer_contents.append(f\"\"\"\n",
" \n",
" {''.join(inner_tabs_html)}\n",
" {''.join(inner_contents_html)}\n",
" \n",
" \"\"\")\n",
"\n",
" html_full = f\"\"\"\n",
"\n",
" \n",
" \n",
"\n",
" {''.join(outer_contents)}\n",
"\n",
"\n",
"\n",
"\n",
"\n",
"\"\"\"\n",
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"\n",
"# Example: runs_dict = {\"FamilyA\": [\"runA1\",\"runA2\"], \"FamilyB\": [\"runB1\",\"runB2\"]}\n",
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" inner_tabs_html = []\n",
" inner_contents_html = []\n",
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"\n",
"\n",
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